1.El-Esawi, M. A., Al-Ghamdi, A. A., Ali, H. M. & Ahmad, M. (2019). Overexpression of AtWRKY30 transcription factor enhances heat and drought stress tolerance in wheat (Triticum aestivum L.). Genes, 10, 1-13.
2.Elkelish, A., Qari, S. H., Mazrou, Y. S., Abdelaal, K. A., Hafez, Y. M., Abu-Elsaoud, A. M., Batiha, G. E. S., El-Esawi, M. A. & El Nahhas, N. (2020). Exogenous ascorbic acid induced chilling tolerance in tomato plants through modulating metabolism, osmolytes, antioxidants, and transcriptional regulation of catalase and heat shock proteins. Plants, 9, 431-452.
3.Soliman, M., Elkelish, A., Souad, T., Alhaithloul, H. & Farooq, M. (2020). Brassinosteroid seed priming with nitrogen supplementation improves salt tolerance in soybean. Physiology and Molecular Biology of Plants, 26, 501-511.
4.Jahromi, F., Aroca, R., Porcel, R. & Ruiz-Lozano, J. M. (2008). Influence of salinity on the in vitro development of Glomus intraradices and on the in vivo physiological and molecular responses of mycorrhizal lettuce plants. Microbial Ecology, 55, 45-53.
5.Abedinzadeh, M., Etesami, H. & Alikhani, H. A. (2019). Characterization of rhizosphere and endophytic bacteria from roots of maize (Zea mays L.) plant irrigated with wastewater with biotechnological potential in agriculture. Biorep Technologies, 21, 1-11.
6.Eid, A. M., Salim, S. S., Hassan, S. E. D., Ismail, M. A. & Fouda, A. (2019). Role of endophytes in plant health and abiotic stress management. In Microbiome in plant health and disease. Springer, Singapore. 6, 119-144.
7.Hashim, A. M., Alharbi, B. M., Abdulmajeed, A. M., Elkelish, A., Hozzein, W. N. & Hassan, H. M. (2020). Oxidative stress responses of some endemic plants to high altitudes by intensifying antioxidants and secondary metabolites content. Plants, 9, 2-23.
8.Zamin, M., Fahad, S., Khattak, A. M., Adnan, M., Wahid, F., Raza, A., Wang, D., Saud, S., Noor, M., Bakhat, H. F. & Mubeen, M. (2020). Developing the first halophytic turfgrasses for the urban landscape from native Arabian desert grass. Environ. Science and Pollution Research, 27, 39702-39716.
9.El-Esawi, M. A. & Alayafi, A. A. (2019). Overexpression of rice Rab7 gene improves drought and heat tolerance and increases grain yield in rice (Oryza sativa L.). Genes, 10, 2-16.
10.Fouda, A. H., Hassan, S. E. D., Eid, A. M. & Ewais, E. E. D. (2015). Biotechnological applications of fungal endophytes associated with medicinal plant Asclepias sinaica (Bioss.). Annals of Agricultural Sciences, 60, 95-104.
11.Zarea, M. J., Hajinia, S., Karimi, N., Goltapeh, E. M., Rejali, F. & Varma, A. (2012). Effect of Piriformospora indica and Azospirillum strains from saline or non-saline soil on mitigation of the effects of NaCl. Soil Biology and Biochemistry, 45, 139-146.
12.Ghahfarokhi, R. M. & Goltapeh, M. E. (2010). Potential of the root endophytic fungus Piriformospora indica; Sebacina vermifera and Trichoderma species in biocontrol of take-all disease of wheat Gaeumannomyces graminis var. tritici in vitro. Journal of Agricultural Science and Technology, 6, 11-18.
13.Abdollahi, L., Yaghoubian, Y. & Alavi, S. M. (2015). Effect of Piriformospora indica and Trichoderma tomentosum fungi on basil (Ocimum basilicum L.) growth under copper nitrate levels. Soil Management & Sustainable Production, 5, 13-127.
14.Ansari, M. W., Trivedi, D. K., Sahoo, R. K., Gill, S. S. & Tuteja, N. (2013). A critical review on fungi mediated plant responses with special emphasis to Piriformospora indica on improved production and protection of crops. Plant Physiology and Biochemistry, 70, 403-410.
15.Azuma, R., Ito, N., Nakayama, N., Suwa, R., Nguyen, N. T., Larrinaga-Mayoral, J. Á., Esaka, M., Fujiyama, H. & Saneoka, H. (2010). Fruits are more sensitive to salinity than leaves and stems in pepper plants (Capsicum annuum L.). Scientia Horticulturae, 125, 171-178.
16.Topuz, A. & Ozdemir, F. (2007). Assessment of carotenoids, capsaicinoids and ascorbic acid composition of some selected pepper cultivars (Capsicum annuum L.) grown in Turkey. Journal of Food Composition and Analysis, 20, 596-602.
17.Rezaie, M., Farhoosh, R., Sharif, A., Asili, J. & Iranshahi, M. (2015). Chemical composition, antioxidant and antibacterial properties of Bene (Pistacia atlantica subsp. mutica) hull essential oil. Journal of Food Science and Technology, 52, 6784-6790.
18.Waller, F., Achatz, B., Baltruschat, H., Fodor, J., Becker, K., Fischer, M., Heier, T., Hückelhoven, R., Neumann, C., von Wettstein, D. & Franken, P. (2005). The endophytic fungus Piriformospora indica reprograms barley to salt-stress tolerance, disease resistance, and higher yield. Proceed. Nation. Academic Science Journal, 102, 13386-13391.
19.Khan, A.L., Hamayun, M., Kim, Y. H., Kang, S. M. & Lee, I. J. (2011). Ameliorative symbiosis of endophyte (Penicillium funiculosum LHL06) under salt stress elevated plant growth of Glycine max L. Plant Physiology and Biochemistry, 49, 852-861.
20.ALKahtani, M. D., Fouda, A., Attia, K. A., Al-Otaibi, F., Eid, A. M., Ewais, E. E. D., Hijri, M., St-Arnaud, M., Hassan, S. E. D., Khan, N. & Hafez, Y. M. (2020). Isolation and characterization of plant growth promoting endophytic bacteria from desert plants and their application as bioinoculants for sustainable agriculture. Agronomy, 10, 2-18.
21.Woudenberg, J. H. C., Groenewald, J. Z., Binder, M. & Crous, P. W. (2013). Alternaria redefined. Studies in Mycology, 75, 171-212.
22.Miller, D. N., Bryant, J. E., Madsen, E. L. & Ghiorse, W. (1999). Evaluation and optimization of DNA extraction and purification procedures for soil and sediment samples. Applied and Environmental Microbiology, 65, 4715-4724.
23.Deshmukh, S., Hückelhoven, R., Schäfer, P., Imani, J., Sharma, M., Weiss, M., Waller, F. & Kogel, K. H. (2006). The root endophytic fungus Piriformospora indica requires host cell death for proliferation during mutualistic symbiosis with barley. Proceed. Nation. Academic Science, 103, 18450-18457.
24.Kar, M. & Mishra, D. (1976). Catalase, peroxidase, and polyphenol oxidase activities during rice leaf senescence. Plant Physiology, 57, 315-319.
25.Hasanuzzaman, M., Nahar, K. & Fujita, M. (2013). Plant response to salt stress and role of exogenous protectants to mitigate salt-induced damages. In Ecophysiology and responses of plants under salt stress. Springer, New York, NY. 3, 25-87.
26.Tiwari, S., Singh, S., Pandey, P., Saikia, S. K., Negi, A. S., Gupta, S. K., Pandey, R. & Banerjee, S. (2014). Isolation, structure determination, and antiaging effects of 2, 3-pentanediol from endophytic fungus of Curcuma amada and docking studies. Protoplasma, 251, 1089-1098.
27.Qader, M., Zaman, K. A. U., Hu, Z., Wang, C., Wu, X. & Cao, S. (2021). Aspochalasin H1: a new cyclic aspochalasin from Hawaiian plant-associated endophytic fungus Aspergillus sp. FT1307. Mole, 26, 1-10.
28.Galeano, R. M. S., Franco, D. G., Chaves, P. O., Giannesi, G. C., Masui, D. C., Ruller, R., Corrêa, B. O., da Silva Brasil, M. & Zanoelo, F. F. (2021). Plant growth promoting potential of endophytic Aspergillus niger 9-p isolated from native forage grass in Pantanal of Nhecolândia region, Brazil. Rhizosphere, 18, 2-19.
29.Baazeem, A., Alorabi, M., Manikandan, P., Alotaibi, S. S., Almanea, A., Abdel-Hadi, A., Vijayaraghavan, P., Raj, S. R. F., Kim, Y. O. & Kim, H. J. (2021). Paecilomyces formosus MD12, a Biocontrol Agent to Treat Meloidogyne incognita on Brinjal in Green House. Journal of Fungi, 7, 2-16.
30.Hajizadeh, A., Amini, J., & Abdulzadeh, J. (2014). Introduction of new strains of oak endophyte fungi in Kurdistan province. Rast, 5, 109-122. [In Persian]
31.Van den Brule, T., Lee, C. L. S., Houbraken, J., Haas, P.J., Wösten, H. & Dijksterhuis, J. (2020). Conidial heat resistance of various strains of the food spoilage fungus Paecilomyces variotii correlates with mean spore size, spore shape and size distribution. Food Research International, 137, 1-30.
32.Saleem, A. & El-Shahir, A.A. (2022). Morphological and Molecular Characterization of Some Alternaria Species Isolated from Tomato Fruits Concerning Mycotoxin Production and Polyketide Synthase Genes. Plants, 11, 1-13.
33.Liu, H. F., Liao, J., Chen, X. Y., Liu, Q. K., Yu, Z. H. & Deng, J. X. (2019). A novel species and a new record of Alternaria isolated from two Solanaceae plants in China. Mycological Progress, 18, 1005-1012.
34.Tavakol Noorabadi, M., Babaeizad, V., Zare, R., Asgari, B., Haidukowski, M., Epifani, F., Stea, G., Moretti, A., Logrieco, A. F. & Susca, A. (2020). Isolation, Molecular identification, and mycotoxin production of Aspergillus species isolated from the rhizosphere of sugarcane in the South of Iran. Toxicity, 12, 1-15.
35.Nguyen, T. T. T., Paul, N. C. & Lee, H. B. (2016). Characterization of Paecilomyces variotii and Talaromyces amestolkiae in Korea based on the morphological characteristics and multigene phylogenetic analyses. Mycosphere, 44, 248-259.
36.Moreno-Gavíra, A., Diánez, F., Sánchez-Montesinos, B. & Santos, M. (2020). Paecilomyces variotii as a plant-growth promoter in horticulture. Agronomy, 10, 597-603.
37.Hussein, M. A. & Voigt, K. (2019). Phylogenetic and enzymatic variability of Alternaria species isolated from various substrates in Qena governorate of Upper Egypt. Archives of Phytopathology and Plant Protection, 52, 530-541.
38.Lee, H. B., Patriarca, A. & Magan, N. (2015). Alternaria in food: ecophysiology, mycotoxin production and toxicology. Mycosphere, 43, 93-106.
39.Ramezani, Y., Taheri, P. & Mamarabadi, M. (2019). Identification of Alternaria spp. associated with tomato early blight in Iran and investigating some of their virulence factors. Journal of Plant Pathology, 101, 647-659.
40.Meena, K. K., Sorty, A. M., Bitla, U. M., Choudhary, K., Gupta, P., Pareek, A., Singh, D. P., Prabha, R., Sahu, P. K., Gupta, V. K. & Singh, H. B. (2017). Abiotic stress responses and microbe-mediated mitigation in plants: the omics strategies. Frontiers in Plant Science, 8, 1-6.
41.Sadeghi, F., Samsampour, D., Seyahooei, M. A., Bagheri, A. & Soltani, J. (2020). Fungal endophytes alleviate drought-induced oxidative stress in mandarin (Citrus reticulata L.): toward regulating the ascorbate-glutathione cycle. Scientia Horticulturae, 261, 1-15.
42.Li, X., Han, S., Wang, G., Liu, X., Amombo, E., Xie, Y. & Fu, J. (2017). The fungus Aspergillus aculeatus enhances salt-stress tolerance, metabolite accumulation, and improves forage quality in perennial ryegrass. Frontiers in Microbiology, 8, 1-13.
43.Rho, H., Hsieh, M., Kandel, S. L., Cantillo, J., Doty, S. L. & Kim, S. H. (2018). Do endophytes promote growth of host plants under stress? A meta-analysis on plant stress mitigation by endophytes. Microeconomics, 75, 407-418.
44.Hamayun, M., Hussain, A., Khan, S. A., Kim, H. Y., Khan, A. L., Waqas, M., Irshad, M., Iqbal, A., Rehman, G., Jan, S. & Lee, I. J. (2017). Gibberellins producing endophytic fungus Porostereum spadiceum AGH786 rescues growth of salt affected soybean. Frontiers in Microbiology, 8, 1-13.
45.Farias, G. C., Nunes, K. G., Soares, M. A., de Siqueira, K. A., Lima, W. C., Neves, A. L. R. & de Lacerda, C. F. (2020). Dark septate endophytic fungi mitigate the effects of salt stress on cowpea plants. Brazilian Journal of Microbiology, 51, 243-253.
46.Ahmad, P., Hashem, A., Abd-Allah, E. F., Alqarawi, A. A., John, R., Egamberdieva, D. & Gucel, S. (2015). Role of Trichoderma harzianum in mitigating NaCl stress in Indian mustard (Brassica juncea L.) through antioxidative defense system. Frontiers in Plant Science, 6, 1-15.
47.Saddique, M. A. B., Ali, Z., Khan, A. S., Rana, I. A. & Shamsi, I. H. (2018). Inoculation with the endophyte Piriformospora indica significantly affects mechanisms involved in osmotic stress in rice. Rice, 11, 1-12.
48.Zhang, S., Gan, Y. & Xu, B. (2019). Mechanisms of the IAA and ACC-deaminase producing strain of Trichoderma longibrachiatum T6 in enhancing wheat seedling tolerance to NaCl stress. BMC Plant Biology,19, 1-18.
49.Salope-Sondi, B., Pollmann, S., Gruden, K., Oelmüller, R. & Ludwig-Müller, J. (2015). Improvement of root architecture under abiotic stress through control of auxin homeostasis in Arabidopsis and Brassica crops. Endocy. Cell Research, 26, 100-111.
50.Zaman, K. A. U., Wu, X., Hu, Z., Yoshida, W., Hou, S., Saito, J., Avad, K. A., Hevener, K. E., Alumasa, J. N. & Cao, S. (2021). Antibacterial kaneoheoic acids AF from a Hawaiian fungus Fusarium sp. FM701. Phytochemistry, 181, 112545.
51.Kord, H., Fakheri, B., Ghabooli, M., Solouki, M., Emamjomeh, A., Khatabi, B., Sepehri, M., Salekdeh, G. H. & Ghaffari, M. R. (2019). Salinity-associated microRNAs and their potential roles in mediating salt tolerance in rice colonized by the endophytic root fungus Piriformospora indica. Functional & Integrative Genomics, 19, 659-672.
52.Jogawat, A., Saha, S., Bakshi, M., Dayaman, V., Kumar, M., Dua, M., Varma, A., Oelmüller, R., Tuteja, N. & Johri, A. K. (2013). Piriformospora indica rescues growth diminution of rice seedlings during high salt stress. Plant Signaling & Behavior, 8, 1-6.
53.Aghaei Dargiri, S., Samsampoor, D., Askari Seyahooei, M. & Bagheri, A. (2021). The Role of the Fungal Endophyte Penicillium Chrysogenum in Tomato Plant under Salinity Stress. Journal of Crop Breeding, 13, 84-94.
54.Khan, A. L., Hamayun, M., Kang, S. M., Kim, Y. H., Jung, H. Y., Lee, J. H. & Lee, I. J. (2012). Endophytic fungal association via gibberellins and indole acetic acid can improve plant growth under abiotic stress: an example of Paecilomyces formosus LHL10. BMC Microbiology, 12, 1-14.
55.Anith, K. N., Faseela, K. M., Archana, P. A. & Prathapan, K. D. (2011). Compatibility of Piriformospora indica and Trichoderma harzianum as dual inoculants in black pepper (Piper nigrum L.). Symbiosis, 55, 11-17.
56.Ghorbani, M. H., Zeynali, E., Soltani, A. & Galeshi, S. (2004). The effect of salinity on growth, yield and yield components in two wheat cultivars. Journal of Agricultural Sciences and Natural Resources, 10, 5-13.
57.Ghorbani, A., Razavi, S. M., Ghasemi, O. V. & Pirdeshti, H. (2019). Effects of endophyte fungi symbiosis on some physiological parameters of tomato plants under 10-day long salinity stress. Journal of Plant Process and Function, 7, 193-208.
58.Khan, A. L., Waqas, M., Hamayun, M., Al-Harrasi, A., Al-Rawahi, A., & Lee, I. J. (2013). Co-synergism of endophyte Penicillium resedanum LK6 with salicylic acid helped Capsicum annuum in biomass recovery and osmotic stress mitigation. BMC Microbiology, 13, 1-13.
59.del Carmen Orozco-Mosqueda, M., del Carmen Rocha-Granados, M., Glick, B. R. & Santoyo, G. (2018). Microbiome engineering to improve biocontrol and plant growth-promoting mechanisms. Microbiological Research, 208, 25-31.
60.Arzani, A. (2008). Improving salinity tolerance in crop plants: a biotechnological view. In Vitro Cellular & Developmental Biology – Plant, 44, 373-383.
61.Munns, R. & Tester, M. (2008). Mechanisms of salinity tolerance. Annual Review of Plant Biology, 59, 651-681.
62.Pan, J., Wang, Q. & Snell, W. J. (2005). Cilium-generated signaling and cilia-related disorders. Laboratory Investigation, 85, 452-463.
63.Asada, K. (2019). Production and action of active oxygen species in photosynthetic tissues. In Causes of photooxidative stress and amelioration of defense systems in plants. CRC pres. 28, 77-104.
64.Dudhane, M. P., Borde, M. Y. & Jite, P. K. (2011). Effect of arbuscular mycorrhizal fungi on growth and antioxidant activity in Gmelina arborea Roxb. under salt stress condition. Notulae Scientia Biologicae, 3, 71-78.
65.Garratt, L. C., Janagoudar, B. S., Lowe, K. C., Anthony, P., Power, J. B. & Davey, M. R. (2002). Salinity tolerance and antioxidant status in cotton cultures. Free Radical Biology and Medicine, 33, 502-511.
66.Bagci, S. A., Ekiz, H., Yilmaz, A. & Cakmak, I. (2007). Effects of zinc deficiency and drought on grain yield of field‐grown wheat cultivars in Central Anatolia. Journal of Agronomy and Crop Science, 193, 198-206.
67.Vinale, F., Sivasithamparam, K., Ghisalberti, E. L., Marra, R., Woo, S. L. & Lorito, M. (2008). Trichoderma–plant–pathogen interactions. Soil Biology and Biochemistry, 40, 1-10.